.. java:import:: ch.epfl.leb.alica.interfaces Analyzer

.. java:import:: ch.epfl.leb.alica.interfaces.analyzers AnalyzerStatusPanel

.. java:import:: ij.gui Roi

.. java:import:: ij.process ShortProcessor

.. java:import:: java.util ArrayDeque

.. java:import:: java.util ArrayList

AutoLaseAnalyzer
================

.. java:package:: ch.epfl.leb.alica.acpack.analyzers.autolase
   :noindex:

.. java:type::  class AutoLaseAnalyzer

   This class estimates the density of activations. The density at a particular point relates to the maximum time a certain pixel is "on", or above a certain threshold. The density is calculated as a moving average 30 frames. The code only works for 2 bytes per pixel cameras for now.

   :author: Thomas Pengo

Fields
------
currentDensity
^^^^^^^^^^^^^^

.. java:field::  double currentDensity
   :outertype: AutoLaseAnalyzer

running
^^^^^^^

.. java:field::  boolean running
   :outertype: AutoLaseAnalyzer

stopping
^^^^^^^^

.. java:field::  boolean stopping
   :outertype: AutoLaseAnalyzer

Constructors
------------
AutoLaseAnalyzer
^^^^^^^^^^^^^^^^

.. java:constructor:: public AutoLaseAnalyzer(int threshold)
   :outertype: AutoLaseAnalyzer

Methods
-------
getCurrentValue
^^^^^^^^^^^^^^^

.. java:method:: public double getCurrentValue()
   :outertype: AutoLaseAnalyzer

   Returns error signal value from AutoLase

   :return: estimated averaged max emitter density

getRawCurrentValue
^^^^^^^^^^^^^^^^^^

.. java:method:: public double getRawCurrentValue()
   :outertype: AutoLaseAnalyzer

   Returns raw error signal value from AutoLase

   :return: estimated max emitter density for most recent frame

nextImage
^^^^^^^^^

.. java:method:: public void nextImage(ShortProcessor sp)
   :outertype: AutoLaseAnalyzer

   Analyzes next image and adjusts internal state.

   :param image: image to be analyzed

setParameters
^^^^^^^^^^^^^

.. java:method:: public void setParameters(int threshold)
   :outertype: AutoLaseAnalyzer

setROI
^^^^^^

.. java:method:: public void setROI(Roi roi)
   :outertype: AutoLaseAnalyzer